Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6890
Gene Symbol: TAP1
TAP1
0.020 AlteredExpression disease BEFREE Wnt5a signaling induced phosphorylation increases APT1 activity and promotes melanoma metastatic behavior. 29648538 2018
Entrez Id: 10434
Gene Symbol: LYPLA1
LYPLA1
0.010 AlteredExpression disease BEFREE Wnt5a signaling induced phosphorylation increases APT1 activity and promotes melanoma metastatic behavior. 29648538 2018
Entrez Id: 355
Gene Symbol: FAS
FAS
0.010 AlteredExpression disease BEFREE Wnt5a signaling induced phosphorylation increases APT1 activity and promotes melanoma metastatic behavior. 29648538 2018
Entrez Id: 6490
Gene Symbol: PMEL
PMEL
0.100 Biomarker disease BEFREE With the use of recombinant adenoviruses expressing either MART-1 or gp100 to immunize patients with metastatic melanoma, we evaluated the safety, immunologic, and potential therapeutic aspects of these immunizations. 9862627 1998
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE With the recent approval of the BRAF inhibitor vemurafenib for stage IV metastatic melanoma, use of this agent is expanding in the United States. 23438383 2013
Entrez Id: 5609
Gene Symbol: MAP2K7
MAP2K7
0.100 Biomarker disease BEFREE With the advent of effective MAPK pathway inhibitors, including the US FDA-approved BRAF inhibitors vemurafenib and dabrafenib and MEK inhibitor trametinib, molecular analysis has become an integral part of the care of patients with metastatic melanoma. 26518880 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE With the advent of effective MAPK pathway inhibitors, including the US FDA-approved BRAF inhibitors vemurafenib and dabrafenib and MEK inhibitor trametinib, molecular analysis has become an integral part of the care of patients with metastatic melanoma. 26518880 2016
Entrez Id: 9575
Gene Symbol: CLOCK
CLOCK
0.010 AlteredExpression disease BEFREE With that in mind, we investigated the pathophysiological relevance of clock genes expression in metastatic melanoma. 29946530 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE With new systemic therapies becoming available for metastatic melanoma such as BRAF and PD-1 inhibitors, there is an increasing demand for methods to assist with treatment selection and response monitoring. 26815318 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE While dabrafenib has demonstrated comparable efficacy to vemurafenib in BRAF V600E mutant melanoma patients, the BREAK-MB and dabrafenib/trametinib studies have taken BRAF inhibitor strategies further with evidence of disease activity in patients with metastatic melanoma brain metastases and potential abrogation of BRAF inhibitor resistance. 23621583 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE While BRAF inhibitor therapy has revolutionized the treatment of metastatic melanoma, unanticipated cutaneous toxicities, including the development of cutaneous squamous cell carcinomas (cSCCs), are frequently reported and hinder therapeutic durability. 28129674 2017
Entrez Id: 3930
Gene Symbol: LBR
LBR
0.010 Biomarker disease BEFREE Whereas EBV-transformed lymphoblasts from an established cell line revealed these phenomena at frequencies equal to those in PHA-stimulated lymphocytes and cultured skin fibroblasts, aneuploid cells from a metastatic melanoma displayed them at 50% lower frequency. 3788975 1986
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.050 Biomarker disease BEFREE When a cutoff of 10 ng/mL was used, the sensitivity and specificity of serum osteopontin in detecting metastatic melanoma was 87.5%, and the area under the receiver operator characteristic curve was 96%. 16505010 2006
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.020 AlteredExpression disease BEFREE We were able to demonstrate that CTGF expression is upregulated in nine melanoma cell lines and in primary and metastatic melanoma in situ. 21673687 2011
Entrez Id: 2152
Gene Symbol: F3
F3
0.010 AlteredExpression disease BEFREE We used short hairpin RNA (shRNA)-mediated RNA interference to knock down TF expression in the human metastatic melanoma cell line LOX-L. After transfection with the shRNA construct, 3 stable clones with significantly downregulated TF expression were established. 15386437 2004
Entrez Id: 27351
Gene Symbol: DESI1
DESI1
0.010 Biomarker disease BEFREE We therefore carried out this study to compare the 1-year, 2-year, and median overall survival (OS) among metastatic melanoma patients in pretargeted and post-targeted eras. 29023264 2018
Entrez Id: 159371
Gene Symbol: SLC35G1
SLC35G1
0.010 Biomarker disease BEFREE We therefore carried out this study to compare the 1-year, 2-year, and median overall survival (OS) among metastatic melanoma patients in pretargeted and post-targeted eras. 29023264 2018
Entrez Id: 6678
Gene Symbol: SPARC
SPARC
0.010 AlteredExpression disease BEFREE We then assessed the expression of SPARC mRNA and protein in metastatic melanoma from different anatomic sites and in their corresponding primary tumors, and found that it is overexpressed in lung metastases. 24993904 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE We studied the MC1R status in a cohort of 53 consecutive BRAF-mutated patients with MM treated with BRAFi. 27540956 2016
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 Biomarker disease BEFREE We studied the formalin-fixed paraffin-embedded tumor samples of 36 patients with metastatic melanoma using PD-L1 immunohistochemistry (IHC) and PD-L1/chromosome 9 fluorescent in situ hybridization (FISH). 31335487 2019
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE We studied the efficacy of dabrafenib in patients with BRAF(V600E)-mutated metastatic melanoma. 22735384 2012
Entrez Id: 2315
Gene Symbol: MLANA
MLANA
0.100 Biomarker disease BEFREE We studied the effect of immunohistochemistry (IHC) on mRNA recovery from labeled cells after microdissection from both frozen and formalin-fixed, paraffin-embedded (FFPE) sections, using Melan-A and Ki-67 staining in lymph nodes with metastatic melanoma as a model. 15538113 2004
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE We studied 134 patients with BRAF-mutant metastatic melanoma treated with a BRAFi at Westmead Hospital, Sydney, Australia. 25748298 2015
Entrez Id: 1839
Gene Symbol: HBEGF
HBEGF
0.010 AlteredExpression disease BEFREE We showed the chance of restoring miR-126&126* expression in metastatic melanoma to reduce the amount of mature intracellular heparin-binding EGF like growth factor, thus preventing promyelocytic leukemia zinc finger delocalization and maintaining its repression on miR-221&222 promoter. 26434590 2016
Entrez Id: 406913
Gene Symbol: MIR126
MIR126
0.020 AlteredExpression disease BEFREE We showed the chance of restoring miR-126&126* expression in metastatic melanoma to reduce the amount of mature intracellular heparin-binding EGF like growth factor, thus preventing promyelocytic leukemia zinc finger delocalization and maintaining its repression on miR-221&222 promoter. 26434590 2016